Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COG1 | COG2 | ENSBTAP00000007999 | ENSBTAP00000027073 | Component of oligomeric golgi complex 1. | Component of oligomeric golgi complex 2. | 0.998 |
COG1 | COG3 | ENSBTAP00000007999 | ENSBTAP00000023803 | Component of oligomeric golgi complex 1. | Component of oligomeric golgi complex 3. | 0.997 |
COG1 | COG4 | ENSBTAP00000007999 | ENSBTAP00000017269 | Component of oligomeric golgi complex 1. | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in SNARE-pin assembly and Golgi-to-ER retrograde transport via its interaction with SCFD1. | 0.996 |
COG1 | COG5 | ENSBTAP00000007999 | ENSBTAP00000055601 | Component of oligomeric golgi complex 1. | Conserved oligomeric Golgi complex subunit 5. | 0.997 |
COG1 | COG5-2 | ENSBTAP00000007999 | ENSBTAP00000057090 | Component of oligomeric golgi complex 1. | COG5 protein. | 0.992 |
COG1 | COG6 | ENSBTAP00000007999 | ENSBTAP00000022131 | Component of oligomeric golgi complex 1. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.996 |
COG1 | COG7 | ENSBTAP00000007999 | ENSBTAP00000043047 | Component of oligomeric golgi complex 1. | Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function. | 0.996 |
COG1 | COG8 | ENSBTAP00000007999 | ENSBTAP00000002179 | Component of oligomeric golgi complex 1. | Conserved oligomeric Golgi complex subunit 8; Required for normal Golgi function. | 0.999 |
COG1 | STX16-NPEPL1 | ENSBTAP00000007999 | ENSBTAP00000005055 | Component of oligomeric golgi complex 1. | t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. | 0.907 |
COG1 | STX5 | ENSBTAP00000007999 | ENSBTAP00000043848 | Component of oligomeric golgi complex 1. | Syntaxin-5; Mediates endoplasmic reticulum to Golgi transport. Together with p115/USO1 and GM130/GOLGA2, involved in vesicle tethering and fusion at the cis-Golgi membrane to maintain the stacked and inter- connected structure of the Golgi apparatus. | 0.896 |
COG2 | COG1 | ENSBTAP00000027073 | ENSBTAP00000007999 | Component of oligomeric golgi complex 2. | Component of oligomeric golgi complex 1. | 0.998 |
COG2 | COG3 | ENSBTAP00000027073 | ENSBTAP00000023803 | Component of oligomeric golgi complex 2. | Component of oligomeric golgi complex 3. | 0.997 |
COG2 | COG4 | ENSBTAP00000027073 | ENSBTAP00000017269 | Component of oligomeric golgi complex 2. | Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in SNARE-pin assembly and Golgi-to-ER retrograde transport via its interaction with SCFD1. | 0.998 |
COG2 | COG5 | ENSBTAP00000027073 | ENSBTAP00000055601 | Component of oligomeric golgi complex 2. | Conserved oligomeric Golgi complex subunit 5. | 0.997 |
COG2 | COG5-2 | ENSBTAP00000027073 | ENSBTAP00000057090 | Component of oligomeric golgi complex 2. | COG5 protein. | 0.994 |
COG2 | COG6 | ENSBTAP00000027073 | ENSBTAP00000022131 | Component of oligomeric golgi complex 2. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.996 |
COG2 | COG7 | ENSBTAP00000027073 | ENSBTAP00000043047 | Component of oligomeric golgi complex 2. | Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function. | 0.997 |
COG2 | COG8 | ENSBTAP00000027073 | ENSBTAP00000002179 | Component of oligomeric golgi complex 2. | Conserved oligomeric Golgi complex subunit 8; Required for normal Golgi function. | 0.995 |
COG2 | STX16-NPEPL1 | ENSBTAP00000027073 | ENSBTAP00000005055 | Component of oligomeric golgi complex 2. | t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. | 0.891 |
COG2 | STX5 | ENSBTAP00000027073 | ENSBTAP00000043848 | Component of oligomeric golgi complex 2. | Syntaxin-5; Mediates endoplasmic reticulum to Golgi transport. Together with p115/USO1 and GM130/GOLGA2, involved in vesicle tethering and fusion at the cis-Golgi membrane to maintain the stacked and inter- connected structure of the Golgi apparatus. | 0.899 |
page 1 of 6