Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MEIOB | SHOC1 | ENSBTAP00000037365 | ENSBTAP00000073375 | Meiosis specific with OB-fold. | Shortage in chiasmata 1. | 0.616 |
MEIOB | SPATA22 | ENSBTAP00000037365 | ENSBTAP00000060337 | Meiosis specific with OB-fold. | Spermatogenesis-associated protein 22; Meiosis-specific protein required for homologous recombination in meiosis I. | 0.941 |
MEIOB | SPO11 | ENSBTAP00000037365 | ENSBTAP00000053612 | Meiosis specific with OB-fold. | SPO11 initiator of meiotic double stranded breaks. | 0.790 |
MEIOB | SWT1 | ENSBTAP00000037365 | ENSBTAP00000053406 | Meiosis specific with OB-fold. | SWT1 RNA endoribonuclease homolog. | 0.481 |
MEIOB | SYCE1 | ENSBTAP00000037365 | ENSBTAP00000060304 | Meiosis specific with OB-fold. | Synaptonemal complex central element protein 1; Major component of the transverse central element of synaptonemal complexes (SCS), formed between homologous chromosomes during meiotic prophase. Requires SYCP1 in order to be incorporated into the central element. May have a role in the synaptonemal complex assembly, stabilization and recombination. | 0.715 |
MEIOB | SYCE3 | ENSBTAP00000037365 | ENSBTAP00000054431 | Meiosis specific with OB-fold. | Synaptonemal complex central element protein 3. | 0.744 |
MEIOB | SYCP1 | ENSBTAP00000037365 | ENSBTAP00000074043 | Meiosis specific with OB-fold. | Synaptonemal complex protein 1. | 0.695 |
MEIOB | SYCP3 | ENSBTAP00000037365 | ENSBTAP00000071106 | Meiosis specific with OB-fold. | Synaptonemal complex protein 3; Component of the synaptonemal complexes (SCS), formed between homologous chromosomes during meiotic prophase. Required for centromere pairing during meiosis in male germ cells. Required for normal meiosis during spermatogenesis and male fertility. Plays a lesser role in female fertility. Required for efficient phosphorylation of HORMAD1 and HORMAD2. | 0.772 |
MEIOB | TERB2 | ENSBTAP00000037365 | ENSBTAP00000007813 | Meiosis specific with OB-fold. | Telomere repeats-binding bouquet formation protein 2; Meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis. Component of the MAJIN-TERB1- TERB2 complex, which promotes telomere cap exchange by mediating attachment of telomeric DNA to the inner nuclear membrane and replacement of the protective cap of telomeric chromosomes: in early meiosis, the MAJIN-TERB1-TERB2 complex associates with telomeric DNA and the shelterin/telosome complex. During prophase, the complex matures an [...] | 0.662 |
SHOC1 | MEIOB | ENSBTAP00000073375 | ENSBTAP00000037365 | Shortage in chiasmata 1. | Meiosis specific with OB-fold. | 0.616 |
SHOC1 | SPATA22 | ENSBTAP00000073375 | ENSBTAP00000060337 | Shortage in chiasmata 1. | Spermatogenesis-associated protein 22; Meiosis-specific protein required for homologous recombination in meiosis I. | 0.664 |
SHOC1 | SPO11 | ENSBTAP00000073375 | ENSBTAP00000053612 | Shortage in chiasmata 1. | SPO11 initiator of meiotic double stranded breaks. | 0.625 |
SHOC1 | SYCE1 | ENSBTAP00000073375 | ENSBTAP00000060304 | Shortage in chiasmata 1. | Synaptonemal complex central element protein 1; Major component of the transverse central element of synaptonemal complexes (SCS), formed between homologous chromosomes during meiotic prophase. Requires SYCP1 in order to be incorporated into the central element. May have a role in the synaptonemal complex assembly, stabilization and recombination. | 0.468 |
SHOC1 | SYCE3 | ENSBTAP00000073375 | ENSBTAP00000054431 | Shortage in chiasmata 1. | Synaptonemal complex central element protein 3. | 0.507 |
SHOC1 | SYCP1 | ENSBTAP00000073375 | ENSBTAP00000074043 | Shortage in chiasmata 1. | Synaptonemal complex protein 1. | 0.513 |
SHOC1 | SYCP3 | ENSBTAP00000073375 | ENSBTAP00000071106 | Shortage in chiasmata 1. | Synaptonemal complex protein 3; Component of the synaptonemal complexes (SCS), formed between homologous chromosomes during meiotic prophase. Required for centromere pairing during meiosis in male germ cells. Required for normal meiosis during spermatogenesis and male fertility. Plays a lesser role in female fertility. Required for efficient phosphorylation of HORMAD1 and HORMAD2. | 0.454 |
SHOC1 | TERB2 | ENSBTAP00000073375 | ENSBTAP00000007813 | Shortage in chiasmata 1. | Telomere repeats-binding bouquet formation protein 2; Meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis. Component of the MAJIN-TERB1- TERB2 complex, which promotes telomere cap exchange by mediating attachment of telomeric DNA to the inner nuclear membrane and replacement of the protective cap of telomeric chromosomes: in early meiosis, the MAJIN-TERB1-TERB2 complex associates with telomeric DNA and the shelterin/telosome complex. During prophase, the complex matures an [...] | 0.663 |
SPATA22 | MEIOB | ENSBTAP00000060337 | ENSBTAP00000037365 | Spermatogenesis-associated protein 22; Meiosis-specific protein required for homologous recombination in meiosis I. | Meiosis specific with OB-fold. | 0.941 |
SPATA22 | SHOC1 | ENSBTAP00000060337 | ENSBTAP00000073375 | Spermatogenesis-associated protein 22; Meiosis-specific protein required for homologous recombination in meiosis I. | Shortage in chiasmata 1. | 0.664 |
SPATA22 | SPATA5L1 | ENSBTAP00000060337 | ENSBTAP00000024327 | Spermatogenesis-associated protein 22; Meiosis-specific protein required for homologous recombination in meiosis I. | Spermatogenesis-associated protein 5-like protein 1. | 0.737 |
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