Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3orf67 | NPM3 | ENSBTAP00000064925 | ENSBTAP00000021730 | Chromosome 3 open reading frame 67. | Nucleophosmin/nucleoplasmin 3. | 0.692 |
ENSBTAP00000062775 | LOC511386 | ENSBTAP00000062775 | ENSBTAP00000062247 | Nucleoplasmin domain-containing protein. | Uncharacterized protein. | 0.414 |
ENSBTAP00000062775 | NPM1 | ENSBTAP00000062775 | ENSBTAP00000020363 | Nucleoplasmin domain-containing protein. | Nucleophosmin. | 0.411 |
ENSBTAP00000062775 | NPM1-2 | ENSBTAP00000062775 | ENSBTAP00000047554 | Nucleoplasmin domain-containing protein. | Nucleophosmin; Involved in diverse cellular processes such as ribosome biogenesis, centrosome duplication, protein chaperoning, histone assembly, cell proliferation, and regulation of tumor suppressors p53/TP53 and ARF. Binds ribosome presumably to drive ribosome nuclear export. Associated with nucleolar ribonucleoprotein structures and bind single-stranded nucleic acids. Acts as a chaperonin for the core histones H3, H2B and H4. Stimulates APEX1 endonuclease activity on apurinic/apyrimidinic (AP) double-stranded DNA but inhibits APEX1 endonuclease activity on AP single-stranded RNA. M [...] | 0.407 |
ENSBTAP00000062775 | NPM3 | ENSBTAP00000062775 | ENSBTAP00000021730 | Nucleoplasmin domain-containing protein. | Nucleophosmin/nucleoplasmin 3. | 0.600 |
HAT1 | NPM3 | ENSBTAP00000013355 | ENSBTAP00000021730 | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | Nucleophosmin/nucleoplasmin 3. | 0.496 |
LOC511386 | ENSBTAP00000062775 | ENSBTAP00000062247 | ENSBTAP00000062775 | Uncharacterized protein. | Nucleoplasmin domain-containing protein. | 0.414 |
LOC511386 | NPM1 | ENSBTAP00000062247 | ENSBTAP00000020363 | Uncharacterized protein. | Nucleophosmin. | 0.408 |
LOC511386 | NPM1-2 | ENSBTAP00000062247 | ENSBTAP00000047554 | Uncharacterized protein. | Nucleophosmin; Involved in diverse cellular processes such as ribosome biogenesis, centrosome duplication, protein chaperoning, histone assembly, cell proliferation, and regulation of tumor suppressors p53/TP53 and ARF. Binds ribosome presumably to drive ribosome nuclear export. Associated with nucleolar ribonucleoprotein structures and bind single-stranded nucleic acids. Acts as a chaperonin for the core histones H3, H2B and H4. Stimulates APEX1 endonuclease activity on apurinic/apyrimidinic (AP) double-stranded DNA but inhibits APEX1 endonuclease activity on AP single-stranded RNA. M [...] | 0.409 |
LOC511386 | NPM3 | ENSBTAP00000062247 | ENSBTAP00000021730 | Uncharacterized protein. | Nucleophosmin/nucleoplasmin 3. | 0.632 |
LOC511386 | OGA | ENSBTAP00000062247 | ENSBTAP00000021734 | Uncharacterized protein. | O-GlcNAcase. | 0.420 |
LOC511386 | SSRP1 | ENSBTAP00000062247 | ENSBTAP00000071103 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.450 |
NPM1 | ENSBTAP00000062775 | ENSBTAP00000020363 | ENSBTAP00000062775 | Nucleophosmin. | Nucleoplasmin domain-containing protein. | 0.411 |
NPM1 | LOC511386 | ENSBTAP00000020363 | ENSBTAP00000062247 | Nucleophosmin. | Uncharacterized protein. | 0.408 |
NPM1 | NPM1-2 | ENSBTAP00000020363 | ENSBTAP00000047554 | Nucleophosmin. | Nucleophosmin; Involved in diverse cellular processes such as ribosome biogenesis, centrosome duplication, protein chaperoning, histone assembly, cell proliferation, and regulation of tumor suppressors p53/TP53 and ARF. Binds ribosome presumably to drive ribosome nuclear export. Associated with nucleolar ribonucleoprotein structures and bind single-stranded nucleic acids. Acts as a chaperonin for the core histones H3, H2B and H4. Stimulates APEX1 endonuclease activity on apurinic/apyrimidinic (AP) double-stranded DNA but inhibits APEX1 endonuclease activity on AP single-stranded RNA. M [...] | 0.413 |
NPM1 | NPM3 | ENSBTAP00000020363 | ENSBTAP00000021730 | Nucleophosmin. | Nucleophosmin/nucleoplasmin 3. | 0.640 |
NPM1 | OGA | ENSBTAP00000020363 | ENSBTAP00000021734 | Nucleophosmin. | O-GlcNAcase. | 0.409 |
NPM1 | SSRP1 | ENSBTAP00000020363 | ENSBTAP00000071103 | Nucleophosmin. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.489 |
NPM1-2 | ENSBTAP00000062775 | ENSBTAP00000047554 | ENSBTAP00000062775 | Nucleophosmin; Involved in diverse cellular processes such as ribosome biogenesis, centrosome duplication, protein chaperoning, histone assembly, cell proliferation, and regulation of tumor suppressors p53/TP53 and ARF. Binds ribosome presumably to drive ribosome nuclear export. Associated with nucleolar ribonucleoprotein structures and bind single-stranded nucleic acids. Acts as a chaperonin for the core histones H3, H2B and H4. Stimulates APEX1 endonuclease activity on apurinic/apyrimidinic (AP) double-stranded DNA but inhibits APEX1 endonuclease activity on AP single-stranded RNA. M [...] | Nucleoplasmin domain-containing protein. | 0.407 |
NPM1-2 | LOC511386 | ENSBTAP00000047554 | ENSBTAP00000062247 | Nucleophosmin; Involved in diverse cellular processes such as ribosome biogenesis, centrosome duplication, protein chaperoning, histone assembly, cell proliferation, and regulation of tumor suppressors p53/TP53 and ARF. Binds ribosome presumably to drive ribosome nuclear export. Associated with nucleolar ribonucleoprotein structures and bind single-stranded nucleic acids. Acts as a chaperonin for the core histones H3, H2B and H4. Stimulates APEX1 endonuclease activity on apurinic/apyrimidinic (AP) double-stranded DNA but inhibits APEX1 endonuclease activity on AP single-stranded RNA. M [...] | Uncharacterized protein. | 0.409 |
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