Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMP4 | FOXA2 | ENSBTAP00000004992 | ENSBTAP00000016463 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | Forkhead box A2. | 0.812 |
BMP4 | GATA4 | ENSBTAP00000004992 | ENSBTAP00000007134 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | GATA binding protein 4. | 0.727 |
BMP4 | MIXL1 | ENSBTAP00000004992 | ENSBTAP00000044510 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | Mix paired-like homeobox. | 0.661 |
BMP4 | NANOG | ENSBTAP00000004992 | ENSBTAP00000027863 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | Homeobox protein NANOG; Transcription regulator involved in inner cell mass and embryonic stem (ES) cells proliferation and self-renewal. Imposes pluripotency on ES cells and prevents their differentiation towards extraembryonic endoderm and trophectoderm lineages. Blocks bone morphogenetic protein-induced mesoderm differentiation of ES cells by physically interacting with SMAD1 and interfering with the recruitment of coactivators to the active SMAD transcriptional complexes. Acts as a transcriptional activator and repressor. Binds optimally to the DNA consensus sequence 5'-TAAT[GT][GT [...] | 0.857 |
BMP4 | OTX2 | ENSBTAP00000004992 | ENSBTAP00000019616 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | Orthodenticle homeobox 2. | 0.665 |
BMP4 | PAX6 | ENSBTAP00000004992 | ENSBTAP00000063429 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | Paired box protein Pax-6; Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters. Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains (By similarity); Belongs to the paired homeobox family. | 0.716 |
BMP4 | POU5F1 | ENSBTAP00000004992 | ENSBTAP00000028122 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency (By similarity). Belongs to the POU transcription factor family. Class-5 subfamily. | 0.781 |
BMP4 | SOX17 | ENSBTAP00000004992 | ENSBTAP00000007553 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | SRY-box 17. | 0.850 |
BMP4 | TBXT | ENSBTAP00000004992 | ENSBTAP00000024865 | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | T-box transcription factor T. | 0.499 |
FOXA2 | BMP4 | ENSBTAP00000016463 | ENSBTAP00000004992 | Forkhead box A2. | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | 0.812 |
FOXA2 | GATA4 | ENSBTAP00000016463 | ENSBTAP00000007134 | Forkhead box A2. | GATA binding protein 4. | 0.836 |
FOXA2 | MIXL1 | ENSBTAP00000016463 | ENSBTAP00000044510 | Forkhead box A2. | Mix paired-like homeobox. | 0.854 |
FOXA2 | NANOG | ENSBTAP00000016463 | ENSBTAP00000027863 | Forkhead box A2. | Homeobox protein NANOG; Transcription regulator involved in inner cell mass and embryonic stem (ES) cells proliferation and self-renewal. Imposes pluripotency on ES cells and prevents their differentiation towards extraembryonic endoderm and trophectoderm lineages. Blocks bone morphogenetic protein-induced mesoderm differentiation of ES cells by physically interacting with SMAD1 and interfering with the recruitment of coactivators to the active SMAD transcriptional complexes. Acts as a transcriptional activator and repressor. Binds optimally to the DNA consensus sequence 5'-TAAT[GT][GT [...] | 0.891 |
FOXA2 | OTX2 | ENSBTAP00000016463 | ENSBTAP00000019616 | Forkhead box A2. | Orthodenticle homeobox 2. | 0.872 |
FOXA2 | PAX6 | ENSBTAP00000016463 | ENSBTAP00000063429 | Forkhead box A2. | Paired box protein Pax-6; Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters. Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains (By similarity); Belongs to the paired homeobox family. | 0.896 |
FOXA2 | POU5F1 | ENSBTAP00000016463 | ENSBTAP00000028122 | Forkhead box A2. | POU domain, class 5, transcription factor 1; Transcription factor that binds to the octamer motif (5'- ATTTGCAT-3'). Forms a trimeric complex with SOX2 or SOX15 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency (By similarity). Belongs to the POU transcription factor family. Class-5 subfamily. | 0.789 |
FOXA2 | SOX17 | ENSBTAP00000016463 | ENSBTAP00000007553 | Forkhead box A2. | SRY-box 17. | 0.904 |
FOXA2 | TBXT | ENSBTAP00000016463 | ENSBTAP00000024865 | Forkhead box A2. | T-box transcription factor T. | 0.642 |
GATA4 | BMP4 | ENSBTAP00000007134 | ENSBTAP00000004992 | GATA binding protein 4. | Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity). | 0.727 |
GATA4 | FOXA2 | ENSBTAP00000007134 | ENSBTAP00000016463 | GATA binding protein 4. | Forkhead box A2. | 0.836 |
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