STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLX6Distal-less homeobox 6. (175 aa)    
Predicted Functional Partners:
DLX5
Distal-less homeobox 5.
  
  
0.610
LHX6
LIM homeobox 6.
   
  
 0.597
SP9
Sp9 transcription factor.
    
 
 0.530
HAND2
Heart and neural crest derivatives expressed 2.
      
 0.527
GSX1
Uncharacterized protein.
    
 
 0.517
GAD1
Glutamate decarboxylase 1; Catalyzes the production of GABA; Belongs to the group II decarboxylase family.
   
  
 0.476
LHX8
LIM homeobox 8.
   
  
 0.466
IRX4
Iroquois homeobox 4.
    
 
 0.461
SIX3
SIX homeobox 3.
   
  
 0.459
CALB2
Calretinin; Calretinin is a calcium-binding protein which is abundant in auditory neurons.
      
 0.457
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.