Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCAP31 | DUS4L | ENSBTAP00000027379 | ENSBTAP00000061320 | B-cell receptor-associated protein 31. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.757 |
COG5 | COG5-2 | ENSBTAP00000055601 | ENSBTAP00000057090 | Conserved oligomeric Golgi complex subunit 5. | COG5 protein. | 0.951 |
COG5 | DUS4L | ENSBTAP00000055601 | ENSBTAP00000061320 | Conserved oligomeric Golgi complex subunit 5. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.854 |
COG5 | GPR22 | ENSBTAP00000055601 | ENSBTAP00000056452 | Conserved oligomeric Golgi complex subunit 5. | G protein-coupled receptor 22. | 0.815 |
COG5 | HBP1 | ENSBTAP00000055601 | ENSBTAP00000007265 | Conserved oligomeric Golgi complex subunit 5. | HMG box-containing protein 1; Transcriptional repressor that binds to the promoter region of target genes. Plays a role in the regulation of the cell cycle and of the Wnt pathway. Binds preferentially to the sequence 5'- TTCATTCATTCA-3'. Binding to the histone H1.0 promoter is enhanced by interaction with RB1. Disrupts the interaction between DNA and TCF4 (By similarity). | 0.437 |
COG5 | PRKAR2B | ENSBTAP00000055601 | ENSBTAP00000019916 | Conserved oligomeric Golgi complex subunit 5. | cAMP-dependent protein kinase type II-beta regulatory subunit; Regulatory subunit of the cAMP-dependent protein kinases involved in cAMP signaling in cells. Type II regulatory chains mediate membrane association by binding to anchoring proteins, including the MAP2 kinase. | 0.647 |
COG5-2 | COG5 | ENSBTAP00000057090 | ENSBTAP00000055601 | COG5 protein. | Conserved oligomeric Golgi complex subunit 5. | 0.951 |
COG5-2 | DUS4L | ENSBTAP00000057090 | ENSBTAP00000061320 | COG5 protein. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.772 |
COG5-2 | GPR22 | ENSBTAP00000057090 | ENSBTAP00000056452 | COG5 protein. | G protein-coupled receptor 22. | 0.747 |
COG5-2 | HBP1 | ENSBTAP00000057090 | ENSBTAP00000007265 | COG5 protein. | HMG box-containing protein 1; Transcriptional repressor that binds to the promoter region of target genes. Plays a role in the regulation of the cell cycle and of the Wnt pathway. Binds preferentially to the sequence 5'- TTCATTCATTCA-3'. Binding to the histone H1.0 promoter is enhanced by interaction with RB1. Disrupts the interaction between DNA and TCF4 (By similarity). | 0.415 |
COG5-2 | PRKAR2B | ENSBTAP00000057090 | ENSBTAP00000019916 | COG5 protein. | cAMP-dependent protein kinase type II-beta regulatory subunit; Regulatory subunit of the cAMP-dependent protein kinases involved in cAMP signaling in cells. Type II regulatory chains mediate membrane association by binding to anchoring proteins, including the MAP2 kinase. | 0.633 |
DTWD1 | DTWD2 | ENSBTAP00000008144 | ENSBTAP00000002778 | DTW domain containing 1. | DTW domain containing 2. | 0.858 |
DTWD1 | DUS4L | ENSBTAP00000008144 | ENSBTAP00000061320 | DTW domain containing 1. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.660 |
DTWD2 | DTWD1 | ENSBTAP00000002778 | ENSBTAP00000008144 | DTW domain containing 2. | DTW domain containing 1. | 0.858 |
DTWD2 | DUS4L | ENSBTAP00000002778 | ENSBTAP00000061320 | DTW domain containing 2. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.645 |
DUS4L | BCAP31 | ENSBTAP00000061320 | ENSBTAP00000027379 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | B-cell receptor-associated protein 31. | 0.757 |
DUS4L | COG5 | ENSBTAP00000061320 | ENSBTAP00000055601 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | Conserved oligomeric Golgi complex subunit 5. | 0.854 |
DUS4L | COG5-2 | ENSBTAP00000061320 | ENSBTAP00000057090 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | COG5 protein. | 0.772 |
DUS4L | DTWD1 | ENSBTAP00000061320 | ENSBTAP00000008144 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | DTW domain containing 1. | 0.660 |
DUS4L | DTWD2 | ENSBTAP00000061320 | ENSBTAP00000002778 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | DTW domain containing 2. | 0.645 |
page 1 of 2