Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCE1 | API5 | ENSBTAP00000045734 | ENSBTAP00000030612 | ATP binding cassette subfamily E member 1. | Apoptosis inhibitor 5. | 0.617 |
ABCE1 | IREB2 | ENSBTAP00000045734 | ENSBTAP00000058582 | ATP binding cassette subfamily E member 1. | Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family. | 0.470 |
ABCE1 | POLR2B | ENSBTAP00000045734 | ENSBTAP00000025800 | ATP binding cassette subfamily E member 1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.426 |
API5 | ABCE1 | ENSBTAP00000030612 | ENSBTAP00000045734 | Apoptosis inhibitor 5. | ATP binding cassette subfamily E member 1. | 0.617 |
API5 | DAD1 | ENSBTAP00000030612 | ENSBTAP00000025397 | Apoptosis inhibitor 5. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...] | 0.599 |
API5 | DDX42 | ENSBTAP00000030612 | ENSBTAP00000028046 | Apoptosis inhibitor 5. | DEAD-box helicase 42. | 0.627 |
API5 | FGF2 | ENSBTAP00000030612 | ENSBTAP00000007477 | Apoptosis inhibitor 5. | Kidney-derived growth factor; Acts as a ligand for FGFR1, FGFR2, FGFR3 and FGFR4. Also acts as an integrin ligand which is required for FGF2 signaling. Binds to integrin ITGAV:ITGB3. Plays an important role in the regulation of cell survival, cell division, cell differentiation and cell migration. Functions as a potent mitogen in vitro. Can induce angiogenesis. Belongs to the heparin-binding growth factors family. | 0.821 |
API5 | IREB2 | ENSBTAP00000030612 | ENSBTAP00000058582 | Apoptosis inhibitor 5. | Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family. | 0.587 |
API5 | PAK2 | ENSBTAP00000030612 | ENSBTAP00000063137 | Apoptosis inhibitor 5. | Non-specific serine/threonine protein kinase. | 0.584 |
API5 | PIM3 | ENSBTAP00000030612 | ENSBTAP00000068535 | Apoptosis inhibitor 5. | Pim-3 proto-oncogene, serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.584 |
API5 | POLR2B | ENSBTAP00000030612 | ENSBTAP00000025800 | Apoptosis inhibitor 5. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.932 |
API5 | QTRT1 | ENSBTAP00000030612 | ENSBTAP00000057388 | Apoptosis inhibitor 5. | Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] | 0.623 |
API5 | RBM25 | ENSBTAP00000030612 | ENSBTAP00000022826 | Apoptosis inhibitor 5. | RNA binding motif protein 25. | 0.570 |
DAD1 | API5 | ENSBTAP00000025397 | ENSBTAP00000030612 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...] | Apoptosis inhibitor 5. | 0.599 |
DDX42 | API5 | ENSBTAP00000028046 | ENSBTAP00000030612 | DEAD-box helicase 42. | Apoptosis inhibitor 5. | 0.627 |
FGF2 | API5 | ENSBTAP00000007477 | ENSBTAP00000030612 | Kidney-derived growth factor; Acts as a ligand for FGFR1, FGFR2, FGFR3 and FGFR4. Also acts as an integrin ligand which is required for FGF2 signaling. Binds to integrin ITGAV:ITGB3. Plays an important role in the regulation of cell survival, cell division, cell differentiation and cell migration. Functions as a potent mitogen in vitro. Can induce angiogenesis. Belongs to the heparin-binding growth factors family. | Apoptosis inhibitor 5. | 0.821 |
IREB2 | ABCE1 | ENSBTAP00000058582 | ENSBTAP00000045734 | Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family. | ATP binding cassette subfamily E member 1. | 0.470 |
IREB2 | API5 | ENSBTAP00000058582 | ENSBTAP00000030612 | Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family. | Apoptosis inhibitor 5. | 0.587 |
PAK2 | API5 | ENSBTAP00000063137 | ENSBTAP00000030612 | Non-specific serine/threonine protein kinase. | Apoptosis inhibitor 5. | 0.584 |
PIM3 | API5 | ENSBTAP00000068535 | ENSBTAP00000030612 | Pim-3 proto-oncogene, serine/threonine kinase; Belongs to the protein kinase superfamily. | Apoptosis inhibitor 5. | 0.584 |
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