Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DAG1 | NRXN1 | ENSBTAP00000068898 | ENSBTAP00000053469 | Alpha-dystroglycan; The dystroglycan complex is involved in a number of processes including laminin and basement membrane assembly, sacrolemmal stability, cell survival, peripheral nerve myelination, nodal structure, cell migration, and epithelial polarization. Beta-dystroglycan is a transmembrane protein that plays important roles in connecting the extracellular matrix to the cytoskeleton. Acts as a cell adhesion receptor in both muscle and non- muscle tissues. Receptor for both DMD and UTRN and, through these interactions, scaffolds axin to the cytoskeleton. Also functions in cell ad [...] | Neurexin-1; Cell surface protein involved in cell-cell-interactions, exocytosis of secretory granules and regulation of signal transmission. Function is isoform-specific. Alpha-type isoforms have a long N- terminus with six laminin G-like domains and play an important role in synaptic signal transmission. Alpha-type isoforms play a role in the regulation of calcium channel activity and Ca(2+)-triggered neurotransmitter release at synapses and at neuromuscular junctions. They play an important role in Ca(2+)-triggered exocytosis of secretory granules in pituitary gland. They may effect [...] | 0.988 |
DAG1 | NRXN2 | ENSBTAP00000068898 | ENSBTAP00000000307 | Alpha-dystroglycan; The dystroglycan complex is involved in a number of processes including laminin and basement membrane assembly, sacrolemmal stability, cell survival, peripheral nerve myelination, nodal structure, cell migration, and epithelial polarization. Beta-dystroglycan is a transmembrane protein that plays important roles in connecting the extracellular matrix to the cytoskeleton. Acts as a cell adhesion receptor in both muscle and non- muscle tissues. Receptor for both DMD and UTRN and, through these interactions, scaffolds axin to the cytoskeleton. Also functions in cell ad [...] | Neurexin 2. | 0.988 |
DAG1 | NRXN3-2 | ENSBTAP00000068898 | ENSBTAP00000052163 | Alpha-dystroglycan; The dystroglycan complex is involved in a number of processes including laminin and basement membrane assembly, sacrolemmal stability, cell survival, peripheral nerve myelination, nodal structure, cell migration, and epithelial polarization. Beta-dystroglycan is a transmembrane protein that plays important roles in connecting the extracellular matrix to the cytoskeleton. Acts as a cell adhesion receptor in both muscle and non- muscle tissues. Receptor for both DMD and UTRN and, through these interactions, scaffolds axin to the cytoskeleton. Also functions in cell ad [...] | Neurexin-3-beta, C-terminal fragment; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May play a role in angiogenesis (By similarity); Belongs to the neurexin family. | 0.992 |
LRRTM2 | NLGN1 | ENSBTAP00000018866 | ENSBTAP00000042636 | Leucine rich repeat transmembrane neuronal 2. | Neuroligin 1. | 0.766 |
LRRTM2 | NLGN2 | ENSBTAP00000018866 | ENSBTAP00000026987 | Leucine rich repeat transmembrane neuronal 2. | Neuroligin 2. | 0.716 |
LRRTM2 | NLGN3 | ENSBTAP00000018866 | ENSBTAP00000054313 | Leucine rich repeat transmembrane neuronal 2. | Neuroligin 3. | 0.607 |
LRRTM2 | NLGN4X | ENSBTAP00000018866 | ENSBTAP00000039924 | Leucine rich repeat transmembrane neuronal 2. | COesterase domain-containing protein. | 0.623 |
LRRTM2 | NRXN1 | ENSBTAP00000018866 | ENSBTAP00000053469 | Leucine rich repeat transmembrane neuronal 2. | Neurexin-1; Cell surface protein involved in cell-cell-interactions, exocytosis of secretory granules and regulation of signal transmission. Function is isoform-specific. Alpha-type isoforms have a long N- terminus with six laminin G-like domains and play an important role in synaptic signal transmission. Alpha-type isoforms play a role in the regulation of calcium channel activity and Ca(2+)-triggered neurotransmitter release at synapses and at neuromuscular junctions. They play an important role in Ca(2+)-triggered exocytosis of secretory granules in pituitary gland. They may effect [...] | 0.925 |
LRRTM2 | NRXN1-2 | ENSBTAP00000018866 | ENSBTAP00000044872 | Leucine rich repeat transmembrane neuronal 2. | Neurexin-1-beta; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion by forming intracellular junctions through binding to neuroligins. May play a role in formation or maintenance of synaptic junctions. May mediate intracellular signaling. May play a role in angiogenesis (By similarity). | 0.972 |
LRRTM2 | NRXN2 | ENSBTAP00000018866 | ENSBTAP00000000307 | Leucine rich repeat transmembrane neuronal 2. | Neurexin 2. | 0.910 |
LRRTM2 | NRXN3-2 | ENSBTAP00000018866 | ENSBTAP00000052163 | Leucine rich repeat transmembrane neuronal 2. | Neurexin-3-beta, C-terminal fragment; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May play a role in angiogenesis (By similarity); Belongs to the neurexin family. | 0.879 |
NLGN1 | LRRTM2 | ENSBTAP00000042636 | ENSBTAP00000018866 | Neuroligin 1. | Leucine rich repeat transmembrane neuronal 2. | 0.766 |
NLGN1 | NLGN2 | ENSBTAP00000042636 | ENSBTAP00000026987 | Neuroligin 1. | Neuroligin 2. | 0.553 |
NLGN1 | NLGN3 | ENSBTAP00000042636 | ENSBTAP00000054313 | Neuroligin 1. | Neuroligin 3. | 0.623 |
NLGN1 | NLGN4X | ENSBTAP00000042636 | ENSBTAP00000039924 | Neuroligin 1. | COesterase domain-containing protein. | 0.512 |
NLGN1 | NRXN1 | ENSBTAP00000042636 | ENSBTAP00000053469 | Neuroligin 1. | Neurexin-1; Cell surface protein involved in cell-cell-interactions, exocytosis of secretory granules and regulation of signal transmission. Function is isoform-specific. Alpha-type isoforms have a long N- terminus with six laminin G-like domains and play an important role in synaptic signal transmission. Alpha-type isoforms play a role in the regulation of calcium channel activity and Ca(2+)-triggered neurotransmitter release at synapses and at neuromuscular junctions. They play an important role in Ca(2+)-triggered exocytosis of secretory granules in pituitary gland. They may effect [...] | 0.999 |
NLGN1 | NRXN1-2 | ENSBTAP00000042636 | ENSBTAP00000044872 | Neuroligin 1. | Neurexin-1-beta; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion by forming intracellular junctions through binding to neuroligins. May play a role in formation or maintenance of synaptic junctions. May mediate intracellular signaling. May play a role in angiogenesis (By similarity). | 0.977 |
NLGN1 | NRXN2 | ENSBTAP00000042636 | ENSBTAP00000000307 | Neuroligin 1. | Neurexin 2. | 0.999 |
NLGN1 | NRXN3-2 | ENSBTAP00000042636 | ENSBTAP00000052163 | Neuroligin 1. | Neurexin-3-beta, C-terminal fragment; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May play a role in angiogenesis (By similarity); Belongs to the neurexin family. | 0.999 |
NLGN2 | LRRTM2 | ENSBTAP00000026987 | ENSBTAP00000018866 | Neuroligin 2. | Leucine rich repeat transmembrane neuronal 2. | 0.716 |
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