Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NOP56 | NOP58 | ENSBTAP00000025042 | ENSBTAP00000061048 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | NOP58 ribonucleoprotein. | 0.999 |
NOP56 | PWP2 | ENSBTAP00000025042 | ENSBTAP00000072174 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | WD_REPEATS_REGION domain-containing protein. | 0.995 |
NOP56 | RRP9 | ENSBTAP00000025042 | ENSBTAP00000069175 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.998 |
NOP56 | SNU13 | ENSBTAP00000025042 | ENSBTAP00000008022 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | NHP2-like protein 1, N-terminally processed; Involved in pre-mRNA splicing as component of the spliceosome. Binds to the 5'-stem-loop of U4 snRNA and thereby contributes to spliceosome assembly. The protein undergoes a conformational change upon RNA-binding. | 0.999 |
NOP56 | UTP15 | ENSBTAP00000025042 | ENSBTAP00000036690 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | U3 small nucleolar RNA-associated protein 15 homolog; Ribosome biogenesis factor. Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I. | 0.998 |
NOP56 | UTP18 | ENSBTAP00000025042 | ENSBTAP00000027490 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | UTP18 small subunit processome component. | 0.995 |
NOP56 | UTP4 | ENSBTAP00000025042 | ENSBTAP00000008333 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | UTP4 small subunit processome component. | 0.998 |
NOP56 | WDR3 | ENSBTAP00000025042 | ENSBTAP00000026561 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | WD repeat domain 3. | 0.995 |
NOP56 | WDR43 | ENSBTAP00000025042 | ENSBTAP00000024220 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | WD repeat domain 43. | 0.997 |
NOP56 | WDR75 | ENSBTAP00000025042 | ENSBTAP00000068574 | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | WD repeat domain 75. | 0.993 |
NOP58 | NOP56 | ENSBTAP00000061048 | ENSBTAP00000025042 | NOP58 ribonucleoprotein. | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | 0.999 |
NOP58 | PWP2 | ENSBTAP00000061048 | ENSBTAP00000072174 | NOP58 ribonucleoprotein. | WD_REPEATS_REGION domain-containing protein. | 0.997 |
NOP58 | RRP9 | ENSBTAP00000061048 | ENSBTAP00000069175 | NOP58 ribonucleoprotein. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.999 |
NOP58 | SNU13 | ENSBTAP00000061048 | ENSBTAP00000008022 | NOP58 ribonucleoprotein. | NHP2-like protein 1, N-terminally processed; Involved in pre-mRNA splicing as component of the spliceosome. Binds to the 5'-stem-loop of U4 snRNA and thereby contributes to spliceosome assembly. The protein undergoes a conformational change upon RNA-binding. | 0.999 |
NOP58 | UTP15 | ENSBTAP00000061048 | ENSBTAP00000036690 | NOP58 ribonucleoprotein. | U3 small nucleolar RNA-associated protein 15 homolog; Ribosome biogenesis factor. Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I. | 0.998 |
NOP58 | UTP18 | ENSBTAP00000061048 | ENSBTAP00000027490 | NOP58 ribonucleoprotein. | UTP18 small subunit processome component. | 0.995 |
NOP58 | UTP4 | ENSBTAP00000061048 | ENSBTAP00000008333 | NOP58 ribonucleoprotein. | UTP4 small subunit processome component. | 0.998 |
NOP58 | WDR3 | ENSBTAP00000061048 | ENSBTAP00000026561 | NOP58 ribonucleoprotein. | WD repeat domain 3. | 0.997 |
NOP58 | WDR43 | ENSBTAP00000061048 | ENSBTAP00000024220 | NOP58 ribonucleoprotein. | WD repeat domain 43. | 0.999 |
NOP58 | WDR75 | ENSBTAP00000061048 | ENSBTAP00000068574 | NOP58 ribonucleoprotein. | WD repeat domain 75. | 0.998 |
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