STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD49Ankyrin repeat domain-containing protein 49; May have a role in spermatogenesis where it promotes autophagy in response to serum starvation, via the NF-kappaB pathway. (238 aa)    
Predicted Functional Partners:
FKBPL
FKBP prolyl isomerase like.
    
 
 0.805
SLC25A19
Mitochondrial thiamine pyrophosphate carrier; Mitochondrial transporter mediating uptake of thiamine pyrophosphate (ThPP) into mitochondria.
      
 0.795
KCTD10
Potassium channel tetramerization domain containing 10.
      
 0.760
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.717
SLC13A4
Solute carrier family 13 member 4.
    
 
 0.712
MSANTD4
Myb/SANT-like DNA-binding domain-containing protein 4.
   
 
 0.694
LYSMD1
LysM and putative peptidoglycan-binding domain-containing protein 1.
      
 0.688
FAM110B
Protein FAM110B.
      
 0.678
PHLDB3
Pleckstrin homology like domain family B member 3.
      
 0.663
SLC12A5
Solute carrier family 12 member 5.
    
 
 0.658
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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