STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBTD2Ubiquitin domain-containing protein 2. (234 aa)    
Predicted Functional Partners:
TM2D1
TM2 domain containing 1.
      
 0.743
FAM92A
Protein FAM92A; Acts as a positive regulator of ciliary hedgehog signaling (By similarity). Probable regulator of ciliogenesis involved in limb morphogenesis. In cooperation with CBY1 it is involved in the recruitment and fusion of endosomal vesicles at distal appendages during early stages of ciliogenesis; Belongs to the FAM92 family.
      
 0.708
C2CD2
C2 calcium dependent domain containing 2.
      
 0.694
RCAN3
Calcipressin-3; Inhibits calcineurin-dependent transcriptional responses by binding to the catalytic domain of calcineurin A. Could play a role during central nervous system development (By similarity). Belongs to the RCAN family.
      
 0.685
ENDOD1
Endonuclease domain containing 1.
    
 
 0.685
PABPC5
Poly(A) binding protein cytoplasmic 5.
      
 0.654
TRDMT1
tRNA (cytosine-5-)-methyltransferase; Specifically methylates cytosine 38 in the anticodon loop of tRNA(Asp); Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.636
TMCO4
Transmembrane and coiled-coil domains 4.
      
 0.625
NIPAL2
NIPA like domain containing 2.
      
 0.621
SH3PXD2B
SH3 and PX domains 2B.
      
 0.621
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.