STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD5Tigger transposable element-derived protein 5. (643 aa)    
Predicted Functional Partners:
CCDC24
Coiled-coil domain containing 24.
      
 0.740
SAP30L
SAP30 like.
      
 0.661
BATF2
Basic leucine zipper ATF-like transcription factor 2.
    
 
 0.577
SAC3D1
SAC3 domain containing 1.
   
  
 0.561
POGK
Pogo transposable element derived with KRAB domain.
      
 0.538
TBX1
T-box transcription factor 1.
      
 0.531
NRARP
NOTCH regulated ankyrin repeat protein.
   
  
 0.502
SETMAR
Histone-lysine N-methyltransferase SETMAR; Histone methyltransferase that methylates 'Lys-4' and 'Lys- 36' of histone H3, 2 specific tags for epigenetic transcriptional activation. Specifically mediates dimethylation of H3 'Lys-36'. Belongs to the class V-like SAM-binding methyltransferase superfamily.
   
 
 0.501
CENPB
Centromere protein B.
  
  
0.479
CRKL
CRK like proto-oncogene, adaptor protein.
   
    0.456
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.