STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B1806_05760Unannotated protein. (404 aa)    
Predicted Functional Partners:
B1806_05765
Unannotated protein.
 
     0.950
B1806_05770
Unannotated protein.
 
     0.950
B1806_05775
Unannotated protein.
 
   
 0.942
B1806_05800
Unannotated protein.
 
     0.682
B1806_05790
Unannotated protein.
       0.646
B1806_05780
Unannotated protein.
       0.642
B1806_05785
Unannotated protein.
       0.642
B1806_05795
Unannotated protein.
       0.642
B1806_05805
Unannotated protein.
       0.426
B1806_05810
Unannotated protein.
       0.426
Your Current Organism:
Metallibacterium scheffleri
NCBI taxonomy Id: 993689
Other names: DSM 24874, JCM 17596, M. scheffleri, Metallibacterium scheffleri Ziegler et al. 2013, gamma proteobacterium DKE, strain DKE6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.