Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADAMTS5 | COL2A1 | ENSOARP00000015958 | ENSOARP00000020771 | ADAM metallopeptidase with thrombospondin type 1 motif 5. | Collagen type II alpha 1 chain. | 0.852 |
ADAMTS5 | MMP13 | ENSOARP00000015958 | ENSOARP00000005136 | ADAM metallopeptidase with thrombospondin type 1 motif 5. | ZnMc domain-containing protein. | 0.899 |
ADAMTS5 | RUNX2 | ENSOARP00000015958 | ENSOARP00000011107 | ADAM metallopeptidase with thrombospondin type 1 motif 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.630 |
ADAMTS5 | SOX9 | ENSOARP00000015958 | ENSOARP00000014771 | ADAM metallopeptidase with thrombospondin type 1 motif 5. | SRY-box transcription factor 9. | 0.667 |
CD44 | COL2A1 | ENSOARP00000020204 | ENSOARP00000020771 | CD44 molecule (Indian blood group). | Collagen type II alpha 1 chain. | 0.952 |
CD44 | MMP13 | ENSOARP00000020204 | ENSOARP00000005136 | CD44 molecule (Indian blood group). | ZnMc domain-containing protein. | 0.592 |
CD44 | RUNX2 | ENSOARP00000020204 | ENSOARP00000011107 | CD44 molecule (Indian blood group). | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.664 |
CD44 | SOX9 | ENSOARP00000020204 | ENSOARP00000014771 | CD44 molecule (Indian blood group). | SRY-box transcription factor 9. | 0.654 |
COL11A1 | COL11A2 | ENSOARP00000019983 | ENSOARP00000008967 | Collagen type XI alpha 1 chain. | Collagen type XI alpha 2 chain. | 0.845 |
COL11A1 | COL2A1 | ENSOARP00000019983 | ENSOARP00000020771 | Collagen type XI alpha 1 chain. | Collagen type II alpha 1 chain. | 0.912 |
COL11A1 | COL5A1 | ENSOARP00000019983 | ENSOARP00000002264 | Collagen type XI alpha 1 chain. | Collagen type V alpha 1 chain. | 0.490 |
COL11A1 | COL5A3 | ENSOARP00000019983 | ENSOARP00000015091 | Collagen type XI alpha 1 chain. | Collagen type V alpha 3 chain. | 0.497 |
COL11A1 | MMP13 | ENSOARP00000019983 | ENSOARP00000005136 | Collagen type XI alpha 1 chain. | ZnMc domain-containing protein. | 0.435 |
COL11A1 | SOX9 | ENSOARP00000019983 | ENSOARP00000014771 | Collagen type XI alpha 1 chain. | SRY-box transcription factor 9. | 0.450 |
COL11A2 | COL11A1 | ENSOARP00000008967 | ENSOARP00000019983 | Collagen type XI alpha 2 chain. | Collagen type XI alpha 1 chain. | 0.845 |
COL11A2 | COL2A1 | ENSOARP00000008967 | ENSOARP00000020771 | Collagen type XI alpha 2 chain. | Collagen type II alpha 1 chain. | 0.863 |
COL2A1 | ADAMTS5 | ENSOARP00000020771 | ENSOARP00000015958 | Collagen type II alpha 1 chain. | ADAM metallopeptidase with thrombospondin type 1 motif 5. | 0.852 |
COL2A1 | CD44 | ENSOARP00000020771 | ENSOARP00000020204 | Collagen type II alpha 1 chain. | CD44 molecule (Indian blood group). | 0.952 |
COL2A1 | COL11A1 | ENSOARP00000020771 | ENSOARP00000019983 | Collagen type II alpha 1 chain. | Collagen type XI alpha 1 chain. | 0.912 |
COL2A1 | COL11A2 | ENSOARP00000020771 | ENSOARP00000008967 | Collagen type II alpha 1 chain. | Collagen type XI alpha 2 chain. | 0.863 |
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