STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA79930.1ABC transporter substrate-binding protein. (315 aa)    
Predicted Functional Partners:
ETA79929.1
Hypothetical protein.
 
 
 0.978
ETA79928.1
Sulfonate ABC transporter ATP-binding protein.
  
 
 0.910
ETA82260.1
Carboxylate-amine ligase.
 
     0.791
ETA82258.1
Response regulator SirA; Belongs to the sulfur carrier protein TusA family.
 
     0.782
ETA82376.1
Sulfurtransferase.
 
   
 0.779
ETA82143.1
Sulfurtransferase.
 
   
 0.777
ETA79692.1
Nitrate ABC transporter permease.
 
 
 0.740
ETA82256.1
Hypothetical protein.
  
     0.735
ETA82254.1
YeeE/YedE family protein.
  
     0.731
ETA82169.1
Taurine ABC transporter permease.
 
 
 0.707
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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