STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ18136.1Signal transduction histidine kinase. (404 aa)    
Predicted Functional Partners:
SDQ18115.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.970
SDQ19997.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.872
SDQ20278.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.872
SDQ08979.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.871
SDQ20453.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.871
SDR07565.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.871
SDR07370.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.869
SDR00148.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.852
SDR15000.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.849
SDQ36450.1
Two component transcriptional regulator, LuxR family.
  
  0.847
Your Current Organism:
Actinopolyspora saharensis
NCBI taxonomy Id: 995062
Other names: A. saharensis, Actinopolyspora saharensis Meklat et al. 2013 emend. Nouioui et al. 2018, Actinopolyspora sp. H32, CCUG 62966, DSM 45459, strain H32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.