STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1069 aa)    
Predicted Functional Partners:
CECR2
CECR2 histone acetyl-lysine reader.
   
 0.951
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.947
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.937
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.931
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.930
RSF1
Remodeling and spacing factor 1.
   
 0.930
POLE3
DNA polymerase epsilon 3, accessory subunit.
   
 0.890
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.872
ENSOCUP00000030999
CHDCT2 domain-containing protein.
 
 
 
 0.800
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
   
 0.776
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.