STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBINFin bud initiation factor homolog. (211 aa)    
Predicted Functional Partners:
SUSD5
Sushi domain containing 5.
      
 0.651
GLT8D2
Glycosyltransferase 8 domain containing 2.
   
  
 0.618
EXOC3
Exocyst complex component 3.
   
  
 0.568
CBLN3
Cerebellin 3 precursor.
   
  
 0.555
UCMA
Upper zone of growth plate and cartilage matrix associated.
   
  
 0.543
RFTN1
Raftlin, lipid raft linker 1.
      
 0.536
ERG
ETS transcription factor ERG.
   
  
 0.531
CHORDC1
Uncharacterized protein.
      
 0.505
USH1C
USH1 protein network component harmonin.
      
 0.495
CDC42EP2
CDC42 effector protein 2.
      
 0.472
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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