STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX1Caudal type homeobox 1. (266 aa)    
Predicted Functional Partners:
LEF1
Lymphoid enhancer binding factor 1.
   
 
 0.662
CDH17
Cadherin 17.
   
  
 0.565
AXIN2
Axin 2.
      
 0.551
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
  
 0.543
EPC2
Enhancer of polycomb homolog.
      
 0.515
POU5F1
POU domain protein.
   
 
 0.484
REG4
Regenerating family member 4.
   
  
 0.468
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
  
 0.449
FOXA2
Forkhead box A2.
   
  
 0.424
CLDN18
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.419
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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