STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22CSEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (433 aa)    
Predicted Functional Partners:
GOSR2
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.927
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.900
STX18
Syntaxin 18.
   
 0.896
BNIP1
BCL2 interacting protein 1.
   
 0.886
STX7
Syntaxin 7; Belongs to the syntaxin family.
    
 0.875
G1TF45_RABIT
t-SNARE coiled-coil homology domain-containing protein.
   
 0.869
ENSOCUP00000035843
Uncharacterized protein.
   
 0.869
RINT1
RAD50 interactor 1.
   
 0.854
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.847
GOSR1
Golgi SNAP receptor complex member 1.
   
 
 0.846
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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