STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGFB1I1Uncharacterized protein. (1153 aa)    
Predicted Functional Partners:
HAUS1
HAUS augmin like complex subunit 1.
   
 0.746
HAUS3
HAUS augmin like complex subunit 3.
   
 0.738
G1TKH4_RABIT
Uncharacterized protein.
    
 0.695
NOS1AP
PID domain-containing protein.
    
 
 0.626
HAUS5
HAUS augmin like complex subunit 5.
   
 0.623
RBM42
RNA binding motif protein 42.
   
 0.623
ENSOCUP00000033703
Uncharacterized protein.
    
 0.548
ENSOCUP00000029267
Uncharacterized protein.
    
 0.541
FERMT1
Fermitin family member 1.
    
 0.449
FERMT2
Fermitin family member 2.
    
 0.449
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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