STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin 16. (365 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 
 0.768
SNX1
Sorting nexin 1.
      
 0.682
FCHSD2
FCH and double SH3 domains 2.
    
 
 0.674
FCHSD1
FCH and double SH3 domains 1.
    
 
 0.656
DCDC2C
Doublecortin domain containing 2C.
      
 0.648
SNX15
MIT domain-containing protein.
     
 0.635
SNX17
Sorting nexin 17.
      
 0.635
SNX18
Sorting nexin.
   
  
 0.620
SNX2
Sorting nexin 2.
      
 0.606
KLHL23
Kelch like family member 23.
      
 0.604
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.