STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Nuclear RNA export factor 1. (660 aa)    
Predicted Functional Partners:
NXT1
Nuclear transport factor 2 like export factor 1.
    
 0.999
RAE1
Ribonucleic acid export 1.
    
 0.996
THOC5
THO complex 5.
   
 0.987
NXT2
Nuclear transport factor 2 like export factor 2.
   
 0.982
UPF3A
Smg4_UPF3 domain-containing protein.
    
 0.961
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
   
 0.957
NUP98
Nucleoporin 98.
   
 0.951
NUP214
Nucleoporin 214.
   
 0.921
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.911
NUP153
Nucleoporin 153.
   
 0.903
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.