Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYFIP1 | EIF4E | ENSOCUP00000009247 | ENSOCUP00000032078 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Eukaryotic translation initiation factor 4E; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. Component of the CYFIP1-EIF4E-FMR1 complex which binds to the mRNA cap and mediates translational repression. In the CYFIP1-EIF4E-FMR1 complex this subunit mediates the binding to the mRNA cap (By similarity). | 0.989 |
CYFIP1 | EIF4G1 | ENSOCUP00000009247 | ENSOCUP00000032992 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Eukaryotic translation initiation factor 4 gamma 1; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome. | 0.424 |
DDX10 | DDX18 | ENSOCUP00000003333 | ENSOCUP00000024880 | RNA helicase. | RNA helicase. | 0.991 |
DDX10 | DDX55 | ENSOCUP00000003333 | ENSOCUP00000002998 | RNA helicase. | RNA helicase. | 0.690 |
DDX10 | EIF4A1 | ENSOCUP00000003333 | ENSOCUP00000008940 | RNA helicase. | Eukaryotic initiation factor 4A-I; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon. | 0.414 |
DDX10 | EIF4B | ENSOCUP00000003333 | ENSOCUP00000011602 | RNA helicase. | Eukaryotic translation initiation factor 4B. | 0.571 |
DDX10 | EIF4E | ENSOCUP00000003333 | ENSOCUP00000032078 | RNA helicase. | Eukaryotic translation initiation factor 4E; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. Component of the CYFIP1-EIF4E-FMR1 complex which binds to the mRNA cap and mediates translational repression. In the CYFIP1-EIF4E-FMR1 complex this subunit mediates the binding to the mRNA cap (By similarity). | 0.988 |
DDX10 | EIF4G1 | ENSOCUP00000003333 | ENSOCUP00000032992 | RNA helicase. | Eukaryotic translation initiation factor 4 gamma 1; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome. | 0.977 |
DDX10 | EIF4G2 | ENSOCUP00000003333 | ENSOCUP00000046928 | RNA helicase. | Eukaryotic translation initiation factor 4 gamma 2; Appears to play a role in the switch from cap-dependent to IRES-mediated translation during mitosis, apoptosis and viral infection. Cleaved by some caspases and viral proteases. Belongs to the eukaryotic initiation factor 4G family. | 0.436 |
DDX10 | EIF4G3 | ENSOCUP00000003333 | ENSOCUP00000048212 | RNA helicase. | Eukaryotic translation initiation factor 4 gamma 3. | 0.526 |
DDX18 | DDX10 | ENSOCUP00000024880 | ENSOCUP00000003333 | RNA helicase. | RNA helicase. | 0.991 |
DDX18 | DDX55 | ENSOCUP00000024880 | ENSOCUP00000002998 | RNA helicase. | RNA helicase. | 0.904 |
DDX18 | EIF4B | ENSOCUP00000024880 | ENSOCUP00000011602 | RNA helicase. | Eukaryotic translation initiation factor 4B. | 0.693 |
DDX18 | EIF4E | ENSOCUP00000024880 | ENSOCUP00000032078 | RNA helicase. | Eukaryotic translation initiation factor 4E; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. Component of the CYFIP1-EIF4E-FMR1 complex which binds to the mRNA cap and mediates translational repression. In the CYFIP1-EIF4E-FMR1 complex this subunit mediates the binding to the mRNA cap (By similarity). | 0.988 |
DDX18 | EIF4G1 | ENSOCUP00000024880 | ENSOCUP00000032992 | RNA helicase. | Eukaryotic translation initiation factor 4 gamma 1; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome. | 0.976 |
DDX18 | EIF4G2 | ENSOCUP00000024880 | ENSOCUP00000046928 | RNA helicase. | Eukaryotic translation initiation factor 4 gamma 2; Appears to play a role in the switch from cap-dependent to IRES-mediated translation during mitosis, apoptosis and viral infection. Cleaved by some caspases and viral proteases. Belongs to the eukaryotic initiation factor 4G family. | 0.459 |
DDX18 | EIF4G3 | ENSOCUP00000024880 | ENSOCUP00000048212 | RNA helicase. | Eukaryotic translation initiation factor 4 gamma 3. | 0.518 |
DDX55 | DDX10 | ENSOCUP00000002998 | ENSOCUP00000003333 | RNA helicase. | RNA helicase. | 0.690 |
DDX55 | DDX18 | ENSOCUP00000002998 | ENSOCUP00000024880 | RNA helicase. | RNA helicase. | 0.904 |
DDX55 | EIF4B | ENSOCUP00000002998 | ENSOCUP00000011602 | RNA helicase. | Eukaryotic translation initiation factor 4B. | 0.570 |
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