STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNDCholinergic receptor nicotinic delta subunit. (695 aa)    
Predicted Functional Partners:
RAPSN
Receptor associated protein of the synapse.
   
 
 0.915
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.872
MUSK
Receptor protein-tyrosine kinase.
   
 
 0.871
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
   
0.707
CHRNB1
Cholinergic receptor nicotinic beta 1 subunit.
  
 
0.685
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
   
 
 0.662
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
   
0.650
COLQ
Collagen like tail subunit of asymmetric acetylcholinesterase.
    
 
 0.640
MYOG
Myogenin.
   
  
 0.627
ECEL1
Endothelin converting enzyme like 1.
      
 0.613
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.