STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4SIB7_TETNG60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)    
Predicted Functional Partners:
H3BXT4_TETNG
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
H3C370_TETNG
Ribosomal protein L28.
   
 0.999
Q4S563_TETNG
Chromosome 6 SCAF14737, whole genome shotgun sequence.
   
 0.999
H3C3K7_TETNG
Ribosomal protein L39.
   
 0.999
H3C9W0_TETNG
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
Q4TBS0_TETNG
Chromosome 21 SCAF7098, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
H3CBB3_TETNG
Ribosomal protein L35.
   
 0.999
H3CC96_TETNG
Ribosomal protein L10.
   
 0.999
H3CCQ6_TETNG
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
H3CI86_TETNG
Ribosomal protein L8.
   
 0.999
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.