STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DA69_TETNGBRCA1 interacting protein C-terminal helicase 1. (885 aa)    
Predicted Functional Partners:
H3CY12_TETNG
Uncharacterized protein.
   
 0.938
H3CIS0_TETNG
Excision repair cross-complementation group 3.
   
 0.935
H3DG93_TETNG
BRCA1 associated RING domain 1.
   
 0.935
H3CG20_TETNG
General transcription factor IIH subunit.
    
 0.933
H3CM26_TETNG
General transcription factor IIH, polypeptide 1.
    
 0.933
H3DEF9_TETNG
General transcription factor IIH, polypeptide 3.
    
 0.931
H3DIY7_TETNG
MNAT1 component of CDK activating kinase.
    
 0.931
H3C0G9_TETNG
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.924
Q4T5L9_TETNG
General transcription factor IIE, polypeptide 1, alpha.
   
 0.917
H3DDB5_TETNG
Cyclin H; Belongs to the cyclin family.
    
 0.913
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.