STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xkr6XK-related protein 6. (413 aa)    
Predicted Functional Partners:
H3BWW4_TETNG
SH3 domain binding glutamate-rich protein.
      
 0.647
H3CEX3_TETNG
CCM2 scaffold protein.
 
    
 0.647
Q4RR78_TETNG
Chromosome 14 SCAF15003, whole genome shotgun sequence.
      
 0.647
H3CSR2_TETNG
High mobility group 20A.
      
 0.495
smek1
Serine/threonine-protein phosphatase 4 regulatory subunit 3; Regulatory subunit of serine/threonine-protein phosphatase 4. Belongs to the SMEK family.
      
 0.493
H3CUD3_TETNG
Malignant fibrous histiocytoma amplified sequence 1.
      
 0.438
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.