STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DPI1_TETNGMADS-box domain-containing protein. (152 aa)    
Predicted Functional Partners:
H3DI63_TETNG
NK2 homeobox 5.
    
 
 0.676
H3CP99_TETNG
Myogenin.
    
 0.577
Q4S3B9_TETNG
Chromosome 1 SCAF14751, whole genome shotgun sequence.
  
 
0.546
H3CL95_TETNG
E1A binding protein p300 b.
    
 
 0.502
H3D5Y4_TETNG
E1A binding protein p300 a.
    
 
 0.502
H3DP39_TETNG
Catenin (cadherin-associated protein), beta 1.
   
 
 0.493
H3BYN7_TETNG
Mitogen-activated protein kinase 6.
    
 0.489
myf6
Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity).
    
 0.481
MEF2D
Myocyte enhancer factor 2D.
  
0.471
H3D623_TETNG
Myocyte enhancer factor 2d.
  
0.469
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.