STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA64780.1Glutathione S-transferase domain-containing protein. (71 aa)    
Predicted Functional Partners:
AEA64781.1
Glyoxalase family protein.
 
    0.715
AEA64779.1
Hypothetical protein.
 
     0.605
AEA62531.1
TadE family protein.
  
     0.579
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.571
AEA62521.1
Hypothetical protein.
  
     0.571
lysS
Lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.478
AEA59555.1
Hypothetical protein.
  
     0.476
AEA62493.1
Acetyltransferase, GNAT family protein.
  
     0.457
AEA62520.1
Hypothetical protein.
  
     0.443
AEA62488.1
Site-specific recombinase, phage integrase family protein.
  
     0.441
Your Current Organism:
Burkholderia gladioli
NCBI taxonomy Id: 999541
Other names: B. gladioli BSR3, Burkholderia gladioli BSR3, Burkholderia gladioli str. BSR3, Burkholderia gladioli strain BSR3
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