STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHD03056.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (762 aa)    
Predicted Functional Partners:
AHD01864.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.829
AHD02077.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.718
AHD02922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.674
AHD02291.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.651
AHC99597.1
Guanylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.633
AHD01684.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.625
AHC99963.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
 
 
 
 0.618
AHD01740.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.611
AHD02082.1
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.595
AHD02220.1
Type 11 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.586
Your Current Organism:
Leisingera methylohalidivorans
NCBI taxonomy Id: 999552
Other names: L. methylohalidivorans DSM 14336, Leisingera methylohalidivorans DSM 14336, Leisingera methylohalidivorans MB2, Leisingera methylohalidivorans str. DSM 14336, Leisingera methylohalidivorans strain DSM 14336
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.