STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT36981.1Dimethylglycine dehydrogenase; Belongs to the GcvT family. (829 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 0.997
SFU16645.1
Sarcosine oxidase subunit delta.
 
 0.989
SFU05834.1
Sarcosine oxidase subunit delta.
 
 0.978
SFU16945.1
Sarcosine oxidase subunit alpha/sarcosine oxidase subunit delta.
 
 0.977
SFU16636.1
Sarcosine oxidase subunit gamma.
 
 0.973
SFU16641.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
0.972
SFT93971.1
Sarcosine oxidase subunit delta.
  
 0.971
SFU05840.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
0.971
SFU16950.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
0.971
SFT93959.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
0.969
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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