STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT76153.1Ornithine-acyl[acyl carrier protein] N-acyltransferase. (246 aa)    
Predicted Functional Partners:
SFT69711.1
Lyso-ornithine lipid acyltransferase.
 
  
 0.914
SFT76137.1
Beta-barrel assembly machine subunit BamE.
 
     0.764
SFT76118.1
Uncharacterized metal-binding protein YceD, DUF177 family.
 
     0.645
SFT76168.1
ATP-binding cassette, subfamily F, uup.
       0.608
SFU20503.1
AraC-type DNA-binding protein.
  
     0.522
SFU05111.1
Hypothetical protein.
  
     0.444
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.