STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU10932.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
SFU10924.1
Hypothetical protein.
     0.994
SFU10918.1
Cobalt-zinc-cadmium efflux system protein.
       0.792
SFU10906.1
Hypothetical protein.
       0.777
SFU21055.1
Transglutaminase-like superfamily protein.
  
     0.775
SFU04964.1
Catalase.
   
   0.608
SFT73483.1
Hypothetical protein.
  
     0.592
SFT73522.1
Type IV secretion system protein VirB3.
  
     0.560
SFT73510.1
Type IV secretion system protein VirB2.
  
     0.559
SFU10938.1
Cytochrome c-type biogenesis protein.
       0.540
SFT73748.1
Type IV secretion system T-DNA border endonuclease VirD2.
  
     0.460
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.