STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_0163MotA/TolQ/ExbB proton channel family protein. (231 aa)    
Predicted Functional Partners:
TDIS_0698
Biopolymer transport protein ExbD/TolR.
 
 
 0.978
TDIS_1877
Biopolymer transport protein ExbD/TolR.
 
 
 0.939
TDIS_1006
5,10-methylenetetrahydrofolate reductase.
  
 
 0.840
TDIS_1880
Hypothetical protein.
  
 
 0.831
TDIS_0161
Menaquinone via futalosine step 2.
       0.792
mqnD
Menaquinone via futalosine step 4; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.
       0.792
pal
Peptidoglycan-associated lipoprotein precursor; Belongs to the Pal lipoprotein family.
 
   
 0.772
TDIS_0699
Hypothetical protein.
  
 
 0.751
TDIS_1430
Outer membrane protein assembly factor YaeT precursor.
  
     0.719
TDIS_0586
Translocation protein TolB.
 
  
 0.703
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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