STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_1870Vitamin B12 ABC transporter, ATPase component BtuD. (271 aa)    
Predicted Functional Partners:
TDIS_1871
Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.998
TDIS_1872
iron(III) ABC transporter, periplasmic iron-binding protein (ceuE).
 
 0.993
TDIS_1830
Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.991
TDIS_1832
Vitamin B12 ABC transporter, B12-binding component BtuF.
 
 0.943
TDIS_1875
TonB-dependent receptor.
 
  
 0.847
TDIS_1868
ChlI component of cobalt chelatase involved in B12 biosynthesis.
  
    0.838
TDIS_1874
Hypothetical protein.
  
    0.783
TDIS_1867
ChlI component of cobalt chelatase involved in B12 biosynthesis.
       0.778
TDIS_1869
CobN component of cobalt chelatase involved in B12 biosynthesis.
  
    0.777
TDIS_1873
Nickel insertion protein.
       0.773
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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