STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aseR_1HTH-type transcriptional repressor AseR. (113 aa)    
Predicted Functional Partners:
KLU63402.1
Putative HTH-type transcriptional regulator.
 
  
 0.697
sdpR_1
Transcriptional repressor SdpR.
  
   
 0.590
cdr
Coenzyme A disulfide reductase.
  
  
 0.538
aseR_3
HTH-type transcriptional repressor AseR.
  
   
 0.513
KLU62534.1
Sodium bile acid symporter family protein.
  
  
 0.471
KLU62823.1
Divergent AAA domain protein.
       0.446
ziaA
Zinc-transporting ATPase.
 
  
 0.419
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.415
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.