Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cdr | folD | CEB3_c15300 | CEB3_c23050 | Coenzyme A disulfide reductase. | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.609 |
| cdr | gcvT | CEB3_c15300 | CEB3_c33320 | Coenzyme A disulfide reductase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.752 |
| cdr | guaB | CEB3_c15300 | CEB3_c15030 | Coenzyme A disulfide reductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.639 |
| cdr | npr | CEB3_c15300 | CEB3_c22390 | Coenzyme A disulfide reductase. | NADH peroxidase. | 0.988 |
| cdr | pabB | CEB3_c15300 | CEB3_c24160 | Coenzyme A disulfide reductase. | Aminodeoxychorismate synthase component 1. | 0.617 |
| cdr | pepT_1 | CEB3_c15300 | CEB3_c27820 | Coenzyme A disulfide reductase. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.483 |
| cdr | pepT_2 | CEB3_c15300 | CEB3_c40810 | Coenzyme A disulfide reductase. | Peptidase T. | 0.483 |
| cdr | trxB_1 | CEB3_c15300 | CEB3_c02240 | Coenzyme A disulfide reductase. | Thioredoxin reductase. | 0.938 |
| cdr | ypdF_2 | CEB3_c15300 | CEB3_c22850 | Coenzyme A disulfide reductase. | Aminopeptidase YpdF. | 0.459 |
| folD | cdr | CEB3_c23050 | CEB3_c15300 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Coenzyme A disulfide reductase. | 0.609 |
| folD | gcvT | CEB3_c23050 | CEB3_c33320 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.922 |
| folD | guaB | CEB3_c23050 | CEB3_c15030 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.688 |
| folD | npr | CEB3_c23050 | CEB3_c22390 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | NADH peroxidase. | 0.414 |
| folD | pabB | CEB3_c23050 | CEB3_c24160 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Aminodeoxychorismate synthase component 1. | 0.482 |
| folD | trxB_1 | CEB3_c23050 | CEB3_c02240 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Thioredoxin reductase. | 0.523 |
| folD | ypdF_2 | CEB3_c23050 | CEB3_c22850 | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Aminopeptidase YpdF. | 0.501 |
| gcvT | cdr | CEB3_c33320 | CEB3_c15300 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | Coenzyme A disulfide reductase. | 0.752 |
| gcvT | folD | CEB3_c33320 | CEB3_c23050 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.922 |
| gcvT | npr | CEB3_c33320 | CEB3_c22390 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | NADH peroxidase. | 0.590 |
| gcvT | trxB_1 | CEB3_c33320 | CEB3_c02240 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | Thioredoxin reductase. | 0.684 |
page 1 of 4