STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU59091.1S-adenosyl-L-methionine-binding protein. (269 aa)    
Predicted Functional Partners:
KLU59090.1
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
 
  
  0.736
KLU59092.1
Iron-dicitrate transporter substrate-binding subunit.
 
     0.683
KLU59089.1
Hypothetical protein.
       0.584
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
  0.528
rbn
Ribonuclease BN.
 
     0.520
tadA_2
tRNA-specific adenosine deaminase.
   
 
  0.493
KLU62238.1
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
 
  
  0.454
KLU59088.1
Putative ABC transporter ATP-binding protein.
 
    0.454
KLU62505.1
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
 
  
  0.426
KLU62504.1
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
 
  
  0.416
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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