Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC78 | FAM240A | ENSP00000293889 | ENSP00000490556 | Coiled-coil domain-containing protein 78; Component of the deuterosome, a structure that promotes de novo centriole amplification in multiciliated cells that can generate more than 100 centrioles. Deuterosome-mediated centriole amplification occurs in terminally differentiated multiciliated cells (G1/0) and not in S phase. Essential for centriole amplification and is required for CEP152 localization to the deuterosome. | Protein FAM240A; Family with sequence similarity 240 member A; Belongs to the FAM240 family. | 0.534 |
DNALI1 | FAM240A | ENSP00000296218 | ENSP00000490556 | Axonemal dynein light intermediate polypeptide 1; May play a dynamic role in flagellar motility. | Protein FAM240A; Family with sequence similarity 240 member A; Belongs to the FAM240 family. | 0.475 |
FAM240A | CCDC78 | ENSP00000490556 | ENSP00000293889 | Protein FAM240A; Family with sequence similarity 240 member A; Belongs to the FAM240 family. | Coiled-coil domain-containing protein 78; Component of the deuterosome, a structure that promotes de novo centriole amplification in multiciliated cells that can generate more than 100 centrioles. Deuterosome-mediated centriole amplification occurs in terminally differentiated multiciliated cells (G1/0) and not in S phase. Essential for centriole amplification and is required for CEP152 localization to the deuterosome. | 0.534 |
FAM240A | DNALI1 | ENSP00000490556 | ENSP00000296218 | Protein FAM240A; Family with sequence similarity 240 member A; Belongs to the FAM240 family. | Axonemal dynein light intermediate polypeptide 1; May play a dynamic role in flagellar motility. | 0.475 |
FAM240A | TRIM58 | ENSP00000490556 | ENSP00000355437 | Protein FAM240A; Family with sequence similarity 240 member A; Belongs to the FAM240 family. | E3 ubiquitin-protein ligase TRIM58; E3 ubiquitin ligase induced during late erythropoiesis. Directly binds and ubiquitinates the intermediate chain of the microtubule motor dynein (DYNC1LI1/DYNC1LI2), stimulating the degradation of the dynein holoprotein complex. May participate in the erythroblast enucleation process through regulation of nuclear polarization. | 0.448 |
TRIM58 | FAM240A | ENSP00000355437 | ENSP00000490556 | E3 ubiquitin-protein ligase TRIM58; E3 ubiquitin ligase induced during late erythropoiesis. Directly binds and ubiquitinates the intermediate chain of the microtubule motor dynein (DYNC1LI1/DYNC1LI2), stimulating the degradation of the dynein holoprotein complex. May participate in the erythroblast enucleation process through regulation of nuclear polarization. | Protein FAM240A; Family with sequence similarity 240 member A; Belongs to the FAM240 family. | 0.448 |