Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFCAB5 | ERICH6 | ENSP00000378312 | ENSP00000295910 | EF-hand calcium-binding domain-containing protein 5; EF-hand calcium binding domain 5. | Glutamate-rich protein 6; Glutamate rich 6. | 0.449 |
EFCAB5 | RIPOR3 | ENSP00000378312 | ENSP00000045083 | EF-hand calcium-binding domain-containing protein 5; EF-hand calcium binding domain 5. | RIPOR family member 3. | 0.412 |
ERICH6 | EFCAB5 | ENSP00000295910 | ENSP00000378312 | Glutamate-rich protein 6; Glutamate rich 6. | EF-hand calcium-binding domain-containing protein 5; EF-hand calcium binding domain 5. | 0.449 |
ERICH6 | RIPOR3 | ENSP00000295910 | ENSP00000045083 | Glutamate-rich protein 6; Glutamate rich 6. | RIPOR family member 3. | 0.406 |
FAU | RIPOR3 | ENSP00000431822 | ENSP00000045083 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | RIPOR family member 3. | 0.806 |
FAU | RPS24 | ENSP00000431822 | ENSP00000414321 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | 40S ribosomal protein S24; Required for processing of pre-rRNA and maturation of 40S ribosomal subunits; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
FAU | RPS28 | ENSP00000431822 | ENSP00000472469 | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | Ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family. | 0.999 |
HSD17B13 | RIPOR3 | ENSP00000333300 | ENSP00000045083 | Hydroxysteroid 17-beta dehydrogenase 13. | RIPOR family member 3. | 0.461 |
LTC4S | RIPOR3 | ENSP00000292596 | ENSP00000045083 | Leukotriene C4 synthase; Catalyzes the conjugation of leukotriene A4 with reduced glutathione to form leukotriene C4. | RIPOR family member 3. | 0.419 |
RHOA | RHOC | ENSP00000400175 | ENSP00000285735 | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | Rho-related GTP-binding protein RhoC; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Serves as a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Regulates apical junction formation in bronchial epithelial cells. | 0.951 |
RHOA | RIPOR3 | ENSP00000400175 | ENSP00000045083 | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | RIPOR family member 3. | 0.503 |
RHOC | RHOA | ENSP00000285735 | ENSP00000400175 | Rho-related GTP-binding protein RhoC; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Serves as a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Regulates apical junction formation in bronchial epithelial cells. | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | 0.951 |
RHOC | RIPOR3 | ENSP00000285735 | ENSP00000045083 | Rho-related GTP-binding protein RhoC; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Serves as a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Regulates apical junction formation in bronchial epithelial cells. | RIPOR family member 3. | 0.417 |
RIPOR3 | EFCAB5 | ENSP00000045083 | ENSP00000378312 | RIPOR family member 3. | EF-hand calcium-binding domain-containing protein 5; EF-hand calcium binding domain 5. | 0.412 |
RIPOR3 | ERICH6 | ENSP00000045083 | ENSP00000295910 | RIPOR family member 3. | Glutamate-rich protein 6; Glutamate rich 6. | 0.406 |
RIPOR3 | FAU | ENSP00000045083 | ENSP00000431822 | RIPOR family member 3. | Ubiquitin-like protein FUBI; FAU ubiquitin like and ribosomal protein S30 fusion. | 0.806 |
RIPOR3 | HSD17B13 | ENSP00000045083 | ENSP00000333300 | RIPOR family member 3. | Hydroxysteroid 17-beta dehydrogenase 13. | 0.461 |
RIPOR3 | LTC4S | ENSP00000045083 | ENSP00000292596 | RIPOR family member 3. | Leukotriene C4 synthase; Catalyzes the conjugation of leukotriene A4 with reduced glutathione to form leukotriene C4. | 0.419 |
RIPOR3 | RHOA | ENSP00000045083 | ENSP00000400175 | RIPOR family member 3. | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | 0.503 |
RIPOR3 | RHOC | ENSP00000045083 | ENSP00000285735 | RIPOR family member 3. | Rho-related GTP-binding protein RhoC; Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Serves as a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Regulates apical junction formation in bronchial epithelial cells. | 0.417 |
page 1 of 2