Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPL13 | RPL18A | ENSP00000307889 | ENSP00000222247 | Ribosomal protein L13. | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 0.999 |
RPL13 | RPL19 | ENSP00000307889 | ENSP00000225430 | Ribosomal protein L13. | Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
RPL13 | RPL35 | ENSP00000307889 | ENSP00000259469 | Ribosomal protein L13. | 60S ribosomal protein L35; Component of the large ribosomal subunit. | 0.999 |
RPL13 | RPL8 | ENSP00000307889 | ENSP00000262584 | Ribosomal protein L13. | 60S ribosomal protein L8; Component of the large ribosomal subunit. | 0.999 |
RPL13 | RPS11 | ENSP00000307889 | ENSP00000270625 | Ribosomal protein L13. | Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. | 0.999 |
RPL13 | RPS12 | ENSP00000307889 | ENSP00000230050 | Ribosomal protein L13. | Ribosomal protein S12. | 0.999 |
RPL13 | RPS23 | ENSP00000307889 | ENSP00000296674 | Ribosomal protein L13. | 40S ribosomal protein S23; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] | 0.999 |
RPL13 | RPS27A | ENSP00000307889 | ENSP00000272317 | Ribosomal protein L13. | Ubiquitin-40S ribosomal protein S27a; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be i [...] | 0.999 |
RPL13 | RPS3 | ENSP00000307889 | ENSP00000278572 | Ribosomal protein L13. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8-dihydro- 8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] | 0.999 |
RPL13 | RPS4X | ENSP00000307889 | ENSP00000362744 | Ribosomal protein L13. | Ribosomal protein S4 X-linked; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
RPL18A | RPL13 | ENSP00000222247 | ENSP00000307889 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L13. | 0.999 |
RPL18A | RPL19 | ENSP00000222247 | ENSP00000225430 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
RPL18A | RPL35 | ENSP00000222247 | ENSP00000259469 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 60S ribosomal protein L35; Component of the large ribosomal subunit. | 0.999 |
RPL18A | RPL8 | ENSP00000222247 | ENSP00000262584 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 60S ribosomal protein L8; Component of the large ribosomal subunit. | 0.999 |
RPL18A | RPS11 | ENSP00000222247 | ENSP00000270625 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. | 0.999 |
RPL18A | RPS12 | ENSP00000222247 | ENSP00000230050 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein S12. | 0.999 |
RPL18A | RPS23 | ENSP00000222247 | ENSP00000296674 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 40S ribosomal protein S23; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] | 0.999 |
RPL18A | RPS27A | ENSP00000222247 | ENSP00000272317 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ubiquitin-40S ribosomal protein S27a; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be i [...] | 0.999 |
RPL18A | RPS3 | ENSP00000222247 | ENSP00000278572 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8-dihydro- 8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] | 0.999 |
RPL18A | RPS4X | ENSP00000222247 | ENSP00000362744 | Ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein S4 X-linked; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.999 |
page 1 of 6