Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OR52B2 | ZNF709 | ENSP00000432011 | ENSP00000380840 | Olfactory receptor 52B2; Odorant receptor; Belongs to the G-protein coupled receptor 1 family. | Zinc finger protein 709; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.420 |
PCBP4 | ZNF709 | ENSP00000417196 | ENSP00000380840 | Poly(rC)-binding protein 4; Single-stranded nucleic acid binding protein that binds preferentially to oligo dC. | Zinc finger protein 709; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.423 |
TRIM28 | ZNF709 | ENSP00000253024 | ENSP00000380840 | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | Zinc finger protein 709; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.522 |
ZNF709 | OR52B2 | ENSP00000380840 | ENSP00000432011 | Zinc finger protein 709; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Olfactory receptor 52B2; Odorant receptor; Belongs to the G-protein coupled receptor 1 family. | 0.420 |
ZNF709 | PCBP4 | ENSP00000380840 | ENSP00000417196 | Zinc finger protein 709; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Poly(rC)-binding protein 4; Single-stranded nucleic acid binding protein that binds preferentially to oligo dC. | 0.423 |
ZNF709 | TRIM28 | ENSP00000380840 | ENSP00000253024 | Zinc finger protein 709; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | 0.522 |