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slr0217 slr0217 slr0145 slr0145 slr0146 slr0146 slr0753 slr0753 sll1080 sll1080 sll1081 sll1081 slr0149 slr0149 slr1113 slr1113 slr1501 slr1501 slr1114 slr1114 sll1392 sll1392
"slr1501" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1501Hypothetical protein (225 aa)    
Predicted Functional Partners:
slr1113
ABC transporter (332 aa)
         
  0.842
sll1392
Hypothetical protein (203 aa)
         
  0.779
slr1114
Hypothetical protein (585 aa)
         
  0.741
slr0753
Probable transport protein (449 aa)
           
  0.629
slr0217
Hypothetical protein (140 aa)
           
  0.629
sll1081
Integral membrane components of other binding-protein-dependent transport system (280 aa)
           
  0.629
sll1080
Hypothetical protein (352 aa)
           
  0.628
slr0149
Hypothetical protein (156 aa)
           
  0.540
slr0146
Hypothetical protein (170 aa)
           
  0.540
slr0145
Hypothetical protein (136 aa)
           
  0.540
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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