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hemF hemF SYNGTS_1621 SYNGTS_1621 hemE hemE hemH hemH slr1790 slr1790 pbsA2 pbsA2 SYNGTS_0008 SYNGTS_0008 slr1184 slr1184 sll1512 sll1512 slr1182 slr1182 slr1183 slr1183
"slr1790" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1790Hypothetical protein (210 aa)    
Predicted Functional Partners:
slr1182
Hypothetical protein (170 aa)
           
  0.940
slr1184
Hypothetical protein (164 aa)
           
  0.939
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (350 aa)
 
   
  0.938
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (387 aa)
 
 
  0.922
slr1183
Hypothetical protein (194 aa)
           
  0.920
sll1512
Hypothetical protein (135 aa)
           
  0.907
hemF
Coproporphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (340 aa)
 
   
  0.852
SYNGTS_0008
No annotation available (360 aa)
           
  0.745
SYNGTS_1621
CobN protein (184 aa)
   
   
    0.686
pbsA2
Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae (250 aa)
           
  0.665
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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