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pheA pheA hom hom lysC lysC tyrA tyrA sll1499 sll1499 sll0938 sll0938 ppc ppc dapB dapB gltB gltB dapF dapF sll0939 sll0939
"sll0938" - Aspartate transaminase in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0938Aspartate transaminase (391 aa)    
Predicted Functional Partners:
lysC
Aspartate kinase (600 aa)
   
  0.980
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (1034 aa)
         
  0.968
sll1499
Ferredoxin-dependent glutamate synthase (1556 aa)
   
  0.954
gltB
Ferredoxin-dependent glutamate synthase (1550 aa)
   
  0.954
hom
Homoserine dehydrogenase (433 aa)
   
  0.899
sll0939
Hypothetical protein (125 aa)
         
  0.891
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
       
  0.866
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (275 aa)
   
 
  0.818
pheA
Chorismate mutase/prephenate dehydratase (297 aa)
 
 
  0.816
tyrA
Prephenate dehydrogenase (279 aa)
       
  0.812
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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