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SYNGTS_1536 SYNGTS_1536 sll0576 sll0576 SYNGTS_2556 SYNGTS_2556 sll1496 sll1496 rfbF rfbF SYNGTS_2019 SYNGTS_2019 SYNGTS_0327 SYNGTS_0327 SYNGTS_0045 SYNGTS_0045 slr1610 slr1610 SYNGTS_0324 SYNGTS_0324 rfbG rfbG
"SYNGTS_0327" - dTDP-6-deoxy-L-mannose-dehydrogenase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_0327dTDP-6-deoxy-L-mannose-dehydrogenase (189 aa)    
Predicted Functional Partners:
SYNGTS_0045
dTDP-6-deoxy-L-mannose-dehydrogenase (293 aa)
 
  0.999
SYNGTS_2556
dTDP-glucose 4,6-dehydratase (342 aa)
 
 
  0.994
rfbG
CDP-glucose-4,6-dehydratase (360 aa)
   
 
  0.979
rfbF
alpha-D-glucose-1-phosphatecytidylyltransferase (256 aa)
   
  0.979
SYNGTS_0324
ABC transporter (430 aa)
   
   
  0.947
slr1610
Hypothetical protein (433 aa)
 
     
  0.946
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
  0.928
SYNGTS_2019
dTDP-4-dehydrorhamnose 3,5-epimerase (182 aa)
   
   
0.916
sll0576
Putative sugar-nucleotide epimerase/dehydratase (312 aa)
   
 
  0.880
SYNGTS_1536
dTDP-glucose 4-6-dehydratase (309 aa)
   
 
  0.850
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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