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sll0039 sll0039 slr0081 slr0081 slr1837 slr1837 slr2024 slr2024 slr1594 slr1594 slr1045 slr1045 sll1292 sll1292 slr1046 slr1046 sll0044 sll0044 slr1593 slr1593 slr2010 slr2010
"slr1594" - PatA subfamily protein Rre5 in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
slr1594PatA subfamily protein Rre5; Controls heterocyst pattern formation (395 aa)    
Predicted Functional Partners:
sll1292
CheY subfamily protein Rre11/TaxY2 (121 aa)
   
     
  0.784
slr1045
Hypothetical protein; Could be part of an ABC transporter complex (263 aa)
           
  0.751
sll0044
Hypothetical protein (161 aa)
           
  0.750
slr2024
CheY subfamily protein Rre13 (180 aa)
   
          0.633
sll0039
CheY subfamily protein PixH/PisH/Rre35 (119 aa)
   
          0.622
slr1593
Hypothetical protein (303 aa)
              0.617
slr0081
OmpR subfamily protein PhoB/HisB/SphR/Rre29 (262 aa)
   
          0.587
slr1837
OmpR subfamily protein ManR/Rre16 (234 aa)
   
          0.581
slr2010
Hypothetical protein (130 aa)
           
  0.539
slr1046
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (126 aa)
           
  0.535
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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