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slr0887 slr0887 psbA1 psbA1 acsF2 acsF2 sll1512 sll1512 slr1182 slr1182 slr1183 slr1183 slr0317 slr0317 pbsA2 pbsA2 slr1184 slr1184 por por slr1790 slr1790
"sll1512" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1512Hypothetical protein (135 aa)    
Predicted Functional Partners:
slr0887
Hypothetical protein (269 aa)
           
  0.932
slr1182
Hypothetical protein (170 aa)
           
  0.922
slr1184
Hypothetical protein (164 aa)
         
  0.921
slr1790
Hypothetical protein (210 aa)
           
  0.907
slr1183
Hypothetical protein (194 aa)
           
  0.899
pbsA2
Heme oxygenase; Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae (250 aa)
         
  0.829
psbA1
Photosystem II D1 protein; Photosystem II (PSII) is a light-driven water- plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors (360 aa)
           
  0.753
acsF2
Magnesium-protoporphyrin IX monomethyl ester cyclase AT103; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) (358 aa)
         
  0.632
slr0317
Hypothetical protein (287 aa)
 
        0.595
por
Protochlorophyllide oxido-reductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) (322 aa)
   
   
  0.528
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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