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sll0486 sll0486 slr1139 slr1139 sll1289 sll1289 slr0233 slr0233 merA merA odhB odhB gcvP gcvP pdhA pdhA pdhB pdhB trxA trxA slr0305 slr0305
"merA" - Mercuric reductase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
merAMercuric reductase (518 aa)    
Predicted Functional Partners:
slr0305
Hypothetical protein (209 aa)
 
    0.992
odhB
Dihydrolipoamide acetyltransferase component(E2) of pyruvate dehydrogenase complex (433 aa)
  0.990
pdhB
Pyruvate dehydrogenase E1 beta subunit (324 aa)
   
  0.979
gcvP
P protein of glycine cleavage complex; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (983 aa)
   
 
  0.955
trxA
Thioredoxin; Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (107 aa)
   
  0.948
sll0486
Clock protein KaiB (102 aa)
   
  0.944
slr0233
Thioredoxin M (105 aa)
   
  0.944
slr1139
Thioredoxin (109 aa)
   
  0.944
sll1289
Hypothetical protein (194 aa)
   
  0.944
pdhA
Pyruvate dehydrogenase E1 component, alphasubunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (342 aa)
   
  0.900
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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